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How to Change or Remove Microsoft 365 Multi-Factor Authentication (MFA) / Authenticator Settings for Any User from Admin Center

Multi-Factor Authentication (MFA), also known as 2-Step Verification or Two-Factor Authentication (2FA), is an important security layer in Microsoft 365 (Off...

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Bison Technical Team Enterprise IT specialists
Updated 27 Nov 2025 2 min read 1,059 total views

Multi-Factor Authentication (MFA), also known as 2-Step Verification or Two-Factor Authentication (2FA), is an important security layer in Microsoft 365 (Office 365).
However, situations occur when an administrator must change, reset, or disable MFA for a user — for example:

  • User lost their phone

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  • Authenticator app not working

  • Phone number changed

  • New device setup

  • Temporary MFA disable for troubleshooting

This article provides a step-by-step guide for Microsoft 365 administrators to modify, reset, or remove authenticator settings.


? Prerequisites

Before proceeding, ensure:

✔ You are logged into Microsoft 365 Admin Center
✔ Your account has Global Admin or Authentication Admin role


? Part 1 — How to Disable MFA for a Specific User (Per-User MFA)

Follow these steps:

1️⃣ Open Microsoft 365 Admin Center → https://admin.microsoft.com
2️⃣ Navigate to:
Users → Active Users
3️⃣ Select the User
4️⃣ On right panel → Click Manage multifactor authentication
5️⃣ A new MFA dashboard will open
6️⃣ Select the user checkbox
7️⃣ Click Disable under Quick Steps
8️⃣ Confirm the action
9️⃣ Ask the user to sign-in again (MFA will no longer be required)

? Note: This only works if MFA is configured as Per-User MFA, NOT enforced by security defaults or conditional access.


? Part 2 — Reset MFA/Authenticator for a User (Without Disabling MFA)

Use this if a user lost phone or needs to re-register MFA:

1️⃣ Open Azure Active Directory / Entra Admin Center
2️⃣ Go to:
Users → All Users → Select User
3️⃣ Click Authentication Methods
4️⃣ Remove old phone, app enrollment, or methods
5️⃣ Click Require re-register MFA
6️⃣ Save changes

Next login → user will be prompted to set up MFA again successfully.


? Part 3 — Remove Organization-Wide MFA Enforcement

If MFA is still enforced, check these two places:

A) Disable Security Defaults

1️⃣ Go to
Azure AD → Properties → Manage Security Defaults
2️⃣ Toggle OFF
3️⃣ Save Changes

B) Check Conditional Access Policies

(For organizations using Entra ID Premium)

1️⃣ Azure AD → Security → Conditional Access
2️⃣ Edit policies enforcing MFA
3️⃣ Exclude user or remove enforcement temporarily
4️⃣ Save changes

⚠️ Disabling org-wide policies affects tenant security — use caution.


? Conclusion

Depending on the authentication setup in your tenant, you must choose the correct method:

RequirementBest Method
Remove MFA completely for one userDisable Per-User MFA
User lost mobile deviceReset MFA / Require re-registration
MFA still enforcedCheck Security Defaults / Conditional Access

With these steps, administrators can fully manage Microsoft 365 MFA settings without user interruption.


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